BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009G04LP1|AL426088
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1093 1658 0.0
>3x_Contig1093
Length = 5169
Score = 1658 bits (832), Expect = 0.0
Identities = 849/858 (98%), Gaps = 1/858 (0%)
Strand = Plus / Minus
Query: 1 atccaaaggaatttaagttaacttcgaaatcgctttcgtcatgcataaactctgggacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2165 atccaaaggaatttaagttaacttcgaaatcgctttcgtcatgcataaactctgggacgg 2106
Query: 61 taatggtccctctgcaaacttcttccccctccttcgtgagcactgcatcaaactccaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2105 taatggtccctctgcaaacttcttccccctccttcgtgagcactgcatcaaactccaaat 2046
Query: 121 gcaagtbaaagtagcagatcaccttacccttcctttgtgaaacgttagagtctccgctac 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 gcaagtcaaagtagcagatcaccttacccttcctttgtgaaacgttagagtctccgctac 1986
Query: 181 aggactttagtttttccacggtgactaagtactcatcgttggaatgttgccagttagtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 aggactttagtttttccacggtgactaagtactcatcgttggaatgttgccagttagtga 1926
Query: 241 aacggcgattcaaataatcgttggtccatcccagtgtatttttatcgacccagtgccagt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 aacgacgattcaaataatcgttggtccatcccagtgtatttttatcgacccagtgccagt 1866
Query: 301 tgttagggtttaaaactaccatggttctgataagacgaaaccttatttaagcaattcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 tgttagggtttaaaactaccatggttctgataagacgaaaccttatttaagcaattcgat 1806
Query: 361 ttccttgagaagcaaagaaagcgcaasva-ccaatccacacactgagaattagacacaca 419
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 1805 ttccttgagaagcaaagaaagcgcaagcaaccaatccacacactgagaattagacacaca 1746
Query: 420 cttggtctgaatacaactaaactcagtatgcgaccacaaagcttaaagaagcgttagtaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1745 cttggtctgaatacaactaaactcagtatgcgaccacaaagcttaaagaagcgttagtaa 1686
Query: 480 acggttgccgggagataaacgtaactgtaaaaaccgtcaacgatattggttcccatatat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1685 acggttgccgggagataaacgtaactgtaaaaaccgtcaacgatattggttcccatatat 1626
Query: 540 atatatgcrtctctgttttaatgtcatctcgacggttaatgaaaatttctggaaaattta 599
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 atatatgcatctctgttttaatgtcatctcgacggttaatgaaaatttctggaaaattta 1566
Query: 600 gatggtgaaatctgtgggaaaratgggcttataaaggtcacgtggacagaaaatggagag 659
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 gatggtgaaatctgtgggaaaaatgggcttataaaggtcacgtggacagaaaatggagag 1506
Query: 660 cccaattaccatttaggatggcacttgtttcccttgtttcccttgtttctttatgatcgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 cccaattaccatttaggatggcacttgtttcccttgtttcccttgtttctttatgatcgg 1446
Query: 720 tgcggtggttgccaatagcttgacgggagcytttttgaactgtgcagaatgcagccatgg 779
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1445 tgcggtggttgccaatagcttgacgggagcctttttgaactgtgcagaatgcagccatgg 1386
Query: 780 tatggataatggttccactttkgtagagatcatctttgcaaaatcctgataatgagcatg 839
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 tatggataatggttccactttggtagagatcatctttgcaaaatcctgataatgagcatg 1326
Query: 840 tgtgcgcacaagacacat 857
||||||||||||||||||
Sbjct: 1325 tgtgcgcacaagacacat 1308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7539
Number of Sequences: 1807
Number of extensions: 7539
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)